Count number of genes by gene list

Returns the number of unique genes or SNPs identified in each gene list.

Usage

genes_per_list(data)

Arguments

data

Data frame in the format of ARDSMAICR::data_genes

Value

A tibble

Details

Input columns for data_genes should be (this is the standard output of the MAIC algorithm):

• gene - HGNC gene symbol - chr

• 1...

• uID - Study unique identifier. Column contains study specific gene score - dbl

• n...

• maic_score - MAIC score for gene - dbl

• contributors - Studies contributing to MAIC score by method - chr

Examples

if (FALSE) {
if(interactive()){
 print(genes_per_list(ARDSMAICR::data_genes), n = 50)
 }
}